625 Commits

Author SHA1 Message Date
gensokyo-dev 6eb37a7749 fix(ci): restore qualification and reduce validation overhead
Use one typed-checker worker by default without changing semantic scope or caller overrides. Reuse the bounded CLI worker for pure argument validation while retaining fresh-process coverage and all upstream cases.

Keep registration tests independent of real package-runner downloads while asserting the actual prewarm command and startup context. Pass the advertised binary_session definition by name to package verification, retaining default SDK validation and complete catalog/contract checks while avoiding compilation of unrelated tool outputs. Preserve all four installed-tarball scenarios and existing deadlines.

Strengthen Hermes preview operation/backup assertions and clarify physical-path routing documentation.

Assisted-by: Suika (gensokyo-skills:suika-scatter-gather-planning)
2026-10-28 00:20:07 +08:00
S1Mon bcc6775dc1 fix(cli): reject non-decimal Android overload index tokens (#7493)
Android overload selection declared a plain number, so the CLI argument
parser coerced the raw token with Number before the schema ran. An empty
token therefore arrived as 0, and hexadecimal, exponent, signed, and
float spellings arrived as their numeric value, leaving both commands to
proceed to artifact admission on a selector the caller never wrote as a
decimal integer.

Reuse the existing decimal token parser that the other integer CLI
options already use. Omitted and explicit decimal zero keep their current
meanings, and the published schema for overloadIndex is unchanged.

Validation: npm run compile, the cli-boundary vitest project for
tests/boundary/cli/cliIntegerArguments.test.ts (56 passed), npm run
typecheck, npm run lint, npm run lint:typed, npm run format:check, npm
run metadata:check, npm run verify:architecture-guards, and npm run
knip:production. The new cases fail against the base source and pass with
the change.

Fixes #7430.

Co-authored-by: S1Mon <251732998+fgfsgsgvo@users.noreply.github.com>
2026-10-27 23:25:32 +08:00
hhang 84f62f76e5 fix(hermes): preserve external YAML anchor consumers (#5152)
* fix(hermes): preserve consumers of anchored registrations

Keep original alias values and comments before setup or uninstall replaces an anchored REA node. Preserve original nested bindings and retained sharing through the common YAML writer.

Fixes #3325

* test(hermes): assert retained alias object identity

* fix(hermes): preserve removed keys and surviving alias owners

* test(cli): restore retained-view cancellation phase coverage

* fix(setup): retain copied Hermes anchor comments

* chore(hermes): reverse incidental merge hook changes

Reverse the merge relative to its included-main parent to restore exact upstream bytes. Reapply only the independently reviewed shared-owner and regression patch in a normal follow-up commit. Keep all ordinary history and normal hooks; no remote push of the rejected hook drift.

Refs #3325

* fix(hermes): retain reviewed shared-owner integration

* chore(hermes): reverse incidental merge hook changes

Reverse the merge relative to its included-main parent to restore exact upstream bytes. Reapply only the independently reviewed shared-owner and regression patch in a normal follow-up commit. Keep all ordinary history and normal hooks; no remote push of the rejected hook drift.

Refs #3325

* fix(hermes): retain exact reviewed shared-owner regression

* test(native): align plist command fixtures with main

Adopt the two maintained-main fixture files as of
dd198d037f. Distinguish exact XML lint
validation from conversion commands and retain truthful provenance,
source-value, format, limitations and unknown-scalar assertions.

The original seven provenance failures reproduce before this repair.
The affected three-file group passes all 86 checks afterward. Product
code and installed-package bytes remain unchanged.

Co-authored-by: morluto <76467478+morluto@users.noreply.github.com>

* fix(native): retain bound-target dispatch failure contracts

Adopt morluto's canonical Apple dispatch metadata owner and bounded MCP
and cleanup controls from 41e10b240c.
Keep fresh admission separate from already-bound target changes and
retain access-denied classification, exact physical causes and cleanup
ownership. Update the two stale unit expectations exposed by Source CI.

The original unit pair reproduces before the correction. Current focused
regressions, package verification and installed feature controls pass.
Only the canonical Apple owner and related controls are ported; this does
not integrate unrelated later-main changes or create another contribution.

Co-authored-by: morluto <76467478+morluto@users.noreply.github.com>

* test: align plist provenance and package listing fixtures

Keep the exact XML lint invocation in CLI provenance and include the
required CLI environment owner in the synthetic package member list.
Preserve binary provenance and all LF, CRLF, literal-CR and bytecode checks.

* revert(hermes): restore canonical main before reviewed replay

This reverts commit 575a10d194, reversing
changes made to bb17e90f27.

* test(cli): retain full cancellation oracle with prepared projection

---------

Co-authored-by: hhang <169027046+xu91102@users.noreply.github.com>
Co-authored-by: gensokyo-dev <342580529+gensokyo-dev@users.noreply.github.com>
Co-authored-by: morluto <76467478+morluto@users.noreply.github.com>
2026-10-27 21:33:17 +08:00
ShuaixinHuang 1201c25542 fix(ci): align static checks and regression fixtures with current contracts (#7349)
* fix(ci): retire unused internal analysis declarations

* test: use an admitted app bundle for provider routing

(cherry picked from commit 00aa17f12a)

* test: keep bundle routing coverage outside oversized group

(cherry picked from commit 8658353b0d)

* fix(ci): align regression fixtures with current admission contracts

* test: bind extraction close fixtures to their ZIP digest

(cherry picked from commit 626d0250db)

* test(cli): match typed analysis outcomes in function detail fixture

* test(ghidra): preserve empty Java property separator framing

* test(electron): retain unknown IPC ownership for native module gaps

* fix(electron): share source-scoped call path identity

* test(captures): assert safe source identity on SAZ refusal

* test(apple): match root occurrence kind to inventory manifest

* fix(examples): align directory root occurrence identity

* test(electron): align equivalent fixture assertions with upstream

* test(process): assert retained capture root identity

* test(windows): declare the PE fixture optional header

* test(ci): refresh owned registration and verifier fixtures

* test(setup): use owned registrations for refresh fixtures

* test(process): control unavailable ownership in CLI cleanup fixture

* test(process): guard controlled compiler output arguments

* test(setup): align equivalent entrypoint guards with upstream

* test(process): release the cleanup target through an owned gate

* test(ci): align semantic identities and owned fixture facts

* test(pcap): retain the upstream DNS wire fixture branch

* test(pcap): use the canonical wire ownership fixture

* test(pcap): assert exact DNS wire query labels

* test(ci): preserve admission and ownership fixture prerequisites

* test(ci): align authenticated fixture and cleanup boundaries

* test(windows): align native artifact fixtures with upstream

* test(android): request complete evidence for inline MCP contracts

* test: avoid pinning diagnostic wording

* test: verify cleanup diagnostics at their source

* test: strengthen evidence and cleanup checks

* test: avoid pinning registration guidance

---------

Co-authored-by: Plastic-time <Plastic-time@users.noreply.github.com>
Co-authored-by: morluto <76467478+morluto@users.noreply.github.com>
2026-10-27 21:24:30 +08:00
gensokyo-dev 03f17cf41d feat(android): apply caller-selected R8 mapping evidence (#7456)
Apply caller-selected R8/ProGuard mappings to shared Android inspections, preserving raw identities, exact verification, ambiguity and provenance. Add retained summaries and bounded/cached parsing, with measured real R8/Conscrypt workflows and review fixes.

Fixes #6329.

Co-authored-by: 555aaditya <107977627+555aaditya@users.noreply.github.com>
2026-10-27 15:47:08 +08:00
morluto 365fb03e73 chore: archive analysis efficiency experiments 2026-10-27 14:10:07 +08:00
gensokyo-dev 7e8f7f6101 feat(android): expose selected manifest component declarations (#7379)
Extend static manifest declarations and retain precise source locations and historical unknowns. Share bounded selected component views across CLI and MCP with complete parent Evidence.

Verified real ApiDemos, an AAPT2-built fixture, legacy Evidence, default-package metadata and relevant CLI/MCP contracts. Recorded whole-task token estimates, timing/resource limits and independent main-failure controls in the PR.

Co-authored-by: Harsh <johiyaharsh@gmail.com>
2026-10-27 12:37:10 +08:00
morluto 3d311d9eca fix(cli): report failed browser cleanup retries 2026-10-27 12:31:48 +08:00
morluto e334a13c79 fix(cli): merge mixed array filter selections 2026-10-27 12:14:36 +08:00
morluto 47a8000cce fix(cli): project nested array slices 2026-10-27 12:06:29 +08:00
morluto 9eb8ba2b29 refactor(cli): use builtin argument owner directly 2026-10-27 09:29:20 +08:00
morluto 25b69bb803 fix(javascript): qualify network receiver evidence 2026-10-27 09:24:22 +08:00
morluto 329325049c refactor(cli): retain typed analysis outcomes through delivery 2026-10-27 09:16:02 +08:00
morluto 0e1500dc8d fix(javascript): qualify renderer endpoint observations 2026-10-27 09:15:24 +08:00
morluto 6d7e627783 fix(cli): preserve literal evidence in Markdown output 2026-10-27 09:04:11 +08:00
morluto aa253bd13f fix(electron): scope IPC pairing to application ownership 2026-10-27 08:55:34 +08:00
morluto 781eb1b28a fix(browser): validate basic credential usernames 2026-10-27 08:52:22 +08:00
gensokyo-dev d109a39105 feat(cli): validate browser scenarios offline (#7343)
Add validate-browser-scenario for offline schema and semantic checks of inline JSON, local files and stdin. Return compact validity/action/secret counts without reading secret values or discovering, launching, attaching to or navigating a browser.

Execution and validation share CLI input admission and the canonical domain schema. Preserve existing capture lifecycle, diagnostics, cancellation and caller-relative executable paths.

Integrates #7149 with attribution. Fixes #5488. Validation includes 24 focused tests, static/build/docs checks, and the preserved real PocketBase scenario with its backend stopped and secret variables unset. Verification and resource/token measurements are recorded in docs/verification/browser-scenario-validation-2026-10-27.md.

Co-authored-by: Ace <1160684883@qq.com>
2026-10-27 08:47:36 +08:00
morluto 6b3a081f36 fix(flutter): retain snapshot cleanup ownership 2026-10-27 08:29:29 +08:00
morluto 82fd223638 refactor(native): consolidate provider-neutral analysis contracts
Move shared function, dossier, inventory, reference and output semantics from the legacy Hopper module to native domain owners. Migrate provider, adapter, test and verifier consumers directly.
2026-10-27 06:43:53 +08:00
morluto 90475ec9e5 fix(artifacts): retain selected keyed archive paths 2026-10-27 06:43:07 +08:00
morluto 567ea4b1e8 refactor(ownership)!: consolidate legacy aliases
Migrate schema, installer, ASN.1, and tooling consumers to their owning definitions. Remove the redundant CI task entry and the deprecated Cutter command-local JSON flag.

BREAKING CHANGE: Replace Cutter --json=true or --json=false with --json-output=true or --json-output=false. Bare --json still controls CLI result formatting.
2026-10-27 06:31:23 +08:00
morluto c27560e434 fix(artifacts): classify selected package names 2026-10-27 06:28:15 +08:00
morluto 3515b26221 refactor(ownership)!: remove redundant aliases
Use canonical owners for literal matches, tool families, MCP schema presentation and IDA protocol selection; remove unused web-bundle reexports. Remove the duplicate CLI command name and keep the canonical compare workflow.

BREAKING CHANGE: rea compare-bundles has been removed. Use rea compare instead. The MCP compare_bundles tool is unchanged.
2026-10-27 06:27:10 +08:00
morluto c4cdb7658b fix(jeb)!: preserve engine refusal diagnostics
Parse JEB failure envelopes at the provider boundary and retain the original response, recovery facts, and selected inputs. Do not infer an unsupported target from undocumented error codes; preserve completed primary observations when metadata requests fail.

BREAKING CHANGE: JEB engine refusals now report execution_failure rather than unsupported_target. Consumers should inspect the retained upstream diagnostics for the engine's reason and recovery facts.
2026-10-27 06:22:10 +08:00
morluto 81adb8977a fix(ghidra): honor current directory in PATH discovery 2026-10-27 05:49:17 +08:00
SII-YDD d4c511ae6e fix(javascript): honor effective symbolic descriptor values (#7222)
Resolve ordered descriptor values at the shared JavaScript fact owner and preserve uncertain intrinsic writes instead of stale exports. Normalize ordinary method values and reuse canonical primitive, prototype, ambient identity and ordering facts across consumers.

384 selected tests, format/static/docs checks, all final CI jobs and reviews pass. Actual Node controls cover 35 bundles; one possibly repeated factory explicitly stays unknown. Shipped Obsidian selected-source complete Evidence matches base/fixed CLI and MCP, with coverage and resource measurements in the PR.

Co-authored-by: gensokyo-dev <342580529+gensokyo-dev@users.noreply.github.com>
2026-10-27 03:08:00 +08:00
Dery Ferdika aa6c1d49fd fix(mcp)!: require allowed hosts for non-loopback HTTP binds (#7172)
Require operator-declared hostnames before serving MCP HTTP outside loopback, preserving Host/Origin gates. Parse hostname identities once, share typed startup recovery across CLI/MCP, and announce an admitted client URL. Generated AgentEnv bundles declare their client/service names and validate DNS/HTTP name identity before export.

Validated through real packaged HTTP requests, direct SDK connection, compiled export refusals, 184 focused tests, static and documentation checks on the refreshed main integration. Final CI and review evidence is recorded in the PR body.

BREAKING CHANGE: non-loopback deployments require MCP_ALLOWED_HOSTS or rea mcp --http --allowed-hosts; bundle names must be unchanged HTTP hostnames within the 63-octet DNS label bound.

Co-authored-by: gensokyo-dev <342580529+gensokyo-dev@users.noreply.github.com>
2026-10-26 22:55:10 +08:00
morluto eb06e263cb fix(plist): own dictionary decoding across Apple workflows
Preserve XML, OpenStep and binary dictionary keys at their format owners. Share validated binary reference facts with materialization while retaining scalar precision, UID identity and bounded expansion. Migrate archive, Interface Builder, native and app-bundle consumers, then remove obsolete key-omission accounting and schema copies.

Validated source regressions and compiled CLI/MCP workflows, including native plist fidelity and archive identity. Typecheck, lint, docs and test discovery pass. No performance benchmarks were required.
2026-10-26 22:20:00 +08:00
gensokyo-dev e3066c1705 fix(deps): upgrade zod without narrowing timestamp inputs
Upgrade Zod to 4.6.6 and refresh locked license inventories. Preserve REA's established timestamp spellings through one shared UTC/offset grammar, including completion-verifier consumers. Size the stdin resource regression from the child's actual heap capacity.

Fixes #7173
Includes the dependency and inventory changes proposed in #7184.

Co-authored-by: tijo95 <georgesarmede@gmail.com>
2026-10-26 20:13:12 +08:00
gensokyo-dev b675073b73 feat(mcp): scope advertised tools by family (#7228)
Scope MCP discovery, setup, doctor, status and recovery guidance by selected tool families using one contract inventory and shared catalog identity. Preserve default discovery, canonical validation and complete Evidence.

Fixes #3246. Builds on #3026. Real libcrypto workflow verifies all 5,367 exports and identical complete Evidence. Static/source/build/docs/Windows/package/Greptile checks pass; ten assertions reproduced identically on clean main and feature across Node 24/22, with cancelled coverage explicitly unverified. Merge uses the user-authorized bypass for baseline failures and unchecked human-readiness declarations, without attesting human review.

Co-authored-by: 0xLLVEL <fakhrezan1@gmail.com>
Co-authored-by: Codebuff <noreply@codebuff.com>
Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com>
2026-10-26 19:50:12 +08:00
morluto cc5a96933a test(mcp): validate selected tools without compiling the entire catalog 2026-10-26 18:26:33 +08:00
morluto 09acf217d9 fix(evidence): preserve source and authenticated observation identity 2026-10-26 16:46:45 +08:00
morluto 071a637a9f refactor(cli): share managed comparison finalization 2026-10-26 13:53:43 +08:00
morluto 991a240606 fix(cli): preserve script export evidence through shared finalization 2026-10-26 13:47:15 +08:00
morluto d69a54d592 fix(setup): register explicit MCP runtimes and preserve launcher identity 2026-10-26 02:33:31 +08:00
gensokyo-dev f69c52a1cf feat(native): page retained load-image observations (#7134)
Add optional native load-image summary delivery and retained selected-row pages through shared CLI/MCP analysis views. Preserve source verification, provenance, unavailable collections, exact row identity and opt-in byte/check payloads.

Preserve direct caller paths during shared CLI summary publication and cover raw/DOL projection contracts through the actual SDK. Real Ghidra ELF CLI/MCP captures, retained and file-backed pages, focused regressions and static checks passed; the PR records existing main schema failures and the JavaScript resource-recovery CI uncertainty.
2026-10-25 21:50:42 +08:00
Kaoru0822 25f0f9934d fix(javascript): close member-path cycles through self stores (#7131)
A write below a slot that stores a value read from the same slot, such
as `s.c = s.c.p; s.c.i = 1` on a parameter, revisits the binding with
one more segment after the stored key on every turn. The cycle closure
only recognized segments added at the front of the path (`node =
node[key]`), so the work-list never terminated and exhausted the owned
worker heap (CodeMirror 5 `mode/stylus/stylus.js`).

Recognize a contiguous segment inserted after a stable base, check that
repeating it after that base can never be pruned, and escape through it
once, as the self-alias rule already does. Front insertions keep their
existing order and result.

Fixes #7130

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-10-25 05:32:29 -07:00
Kaoru0822 e06be06530 fix(cli): report JSON Lines selection refusals as caller errors (#7124)
* fix(cli): report JSON Lines selection refusals as caller errors

A --format jsonl refusal because the selected value is not a record
collection is the caller's output selection, not unreadable analysis
output. Report it as invalid_request/invalid_input that names the
selection and its observed shape, keep the --format json /
--filter-output remediation, and drop the rea doctor advice.

AnalysisInputError gains an optional producer remediation, mirroring
the other refusal classes. The JSON Lines owner examines its documented
boundaries once for both admission and refusal facts.

docs/cli.md now states that columnar results such as
inspect-sqlite-database --table rows are not record collections.

Fixes #7110

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(cli): carry JSON Lines refusal facts as structured observations

JSON Lines refusals now put the location and shape of each refused value
in details.issues[].observed, and the message is built from those facts.
Tests assert the classification, issue path, observed facts, and the
shared remediation constant instead of fixed sentences.

The filtered analysis-view export check now uses a non-empty request
and compares the emitted rows with the unfiltered export.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-10-25 05:26:13 -07:00
Kaoru0822 81afb043f7 fix(javascript): evaluate each short-circuit left operand once (#7126)
Logical branch selection evaluated the left operand to decide which
branches stay reachable, and value evaluation then evaluated the selected
left branch again. In a left-nested `a || b || c ...` chain every level
repeated that, so semantic analysis doubled per operand and a 24-operand
chain exhausted the per-source deadline.

The selection now carries the left operand's value with the branch, and
value evaluation reuses it. Provenance still walks the branch nodes.
Results are unchanged.

Fixes #7115

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-10-25 05:25:54 -07:00
Kaoru0822 0eb3919d69 fix(artifacts): admit raw UDRW disk images (#7106)
* fix(artifacts): admit raw UDRW disk images

Raw (UDRW, UDTO) disk images have no UDIF koly trailer, so target
admission and root inventory both refused them as unsupported binaries.
Recognize disk images in one domain owner (koly trailer, GPT, Apple
partition map, MBR, or an unpartitioned HFS+/HFSX volume header) that
both boundaries consume.

hdiutil reports "has no checksum" for these images; the native reader
now treats that status line as an explicit absent checksum, records the
nonzero verify command, attaches read-only, and reports that integrity
was not verified. Checksum mismatches and unrecognized images are still
refused.

Positional range reads used by these probes now fill until end of file
so short host reads cannot hide a signature.

Fixes #5687

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(artifacts): read disk image signature windows at the recognizer

Target admission passed its first unfilled 4 KiB read to the raw-image
checks, so a short host read could hide a GPT, APM, MBR or HFS+
signature that inventory (which fills its prefix) still observed. The
recognizer now reads its own leading window through the caller's
filling positional read, and target admission fills its format-probe
prefix as well. The controlled short-read regression now covers target
admission alongside inventory.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-10-25 05:20:24 -07:00
gensokyo-dev fc43e285ea feat(browser): retain compact scenario summaries and selected views (#7120)
Retain complete browser scenario Evidence while delivering compact summaries and selected step, event, transaction and text views through shared CLI/MCP workflows. Preserve initial CLI failures across cleanup retries and validate with real Chromium/TodoMVC.

Co-authored-by: Kaoru0822 <208281322+kaoru0822-kitauji@users.noreply.github.com>
Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-10-25 19:03:06 +08:00
RRFZ cc146042d1 fix(cli): preserve literal Markdown table facts (#7073)
* fix(cli): preserve literal Markdown table facts

* test(cli): retain capacity diagnostics through Markdown escaping

* fix(cli): keep intraword underscores readable in Markdown tables

Underscore runs between letters or digits cannot open or close CommonMark emphasis, so escaping them only adds noise to identifiers such as source_index and invalid_request in raw Markdown. Escape underscore runs only at word boundaries and restore the original diagnostic assertions.
2026-10-25 13:55:18 +08:00
ezan 69a2faa120 feat: add FreeBuff agent support for REA setup (#2736)
* feat: add FreeBuff agent support for REA setup

Register FreeBuff as a supported setup client using the shared user
agents directory (~/.agents/mcp.json with mcpServers, skills in
~/.agents/skills), which matches what FreeBuff Desktop loads. Adds the
client definition, boundary tests, supported-agent docs, and the skill
reference client list.

* fix(freebuff): detect FreeBuff from its profile directory, not shared .agents

The ~/.agents marker made FreeBuff appear installed for any home where
REA had installed shared skills (the default skill destination, also
Gemini CLI's), producing false doctor failures. Detect FreeBuff from
its own fixed profile directory ~/.config/freebuff-desktop instead,
and add a regression test covering a home with only the shared agents
skill directory.

* fix(setup): require product evidence for FreeBuff discovery

Address review findings at their producing boundaries and preserve directly affected consumers. Source inspection and git diff --check completed. Tests and automated checks were not run at the user’s explicit request.

* fix(uninstall): retain unverified shared client configuration

* fix(clients): preserve scoped removal evidence

* fix(doctor): omit undefined selectedClientIds under exactOptionalPropertyTypes

Passing selectedClientIds explicitly as undefined fails typecheck on this
branch (TS2379), which blocks the focused test workflow before any test
can run. Spread the option only when defined.

* fix(update): separate ownership evidence from product applicability

rea update's maintenance scope inspected only product applicability
evidence, so when a FreeBuff profile was absent but REA already owned a
version-pinned row in the shared ~/.agents/mcp.json, the plan omitted
freebuff and left the integration stale. FreeBuff now declares its
registration storage as shared, which proves ownership of an owned row
but never product applicability, and maintenance requests ownership
evidence through that declaration instead of reinterpreting the shared
paths. Doctor and setup keep readiness evidence, foreign rows stay out
of maintenance, and the Doctor exactOptionalPropertyTypes fix makes the
focused test workflow runnable.

* test(dotnet): split oversized operand extent diagnostics describe

The describe callback reached 162 lines (max 150), failing
max-lines-per-function and blocking the pre-push check for this branch.
Move the single-case extent scenarios into their own describe; no test
content or order changes.

* fix(update): preserve ZCode's disabled shared registration during maintenance

The shared user agents file doubles as ZCode's fallback, where
`enable: false` disables the registration. Ownership-based maintenance
read that row as a FreeBuff registration, whose format does not
recognize the flag, so the row was selected and the emitted setup
command rewrote it, dropping the flag and silently re-enabling a
registration the user had disabled.

registrationActivation now honors `enable: false` for any client whose
registration storage is shared, because the activation fact binds every
reader of that storage. Maintenance leaves such rows out; doctor
reports them as stale, matching ZCode's own treatment.

* fix(doctor): let explicit client selection authorize the config read

When an ACL or an inaccessible shared parent made every access probe
fail, a client selected by name was omitted before the configuration
read could return its unreadable-config detail, so doctor reported it
as not detected with installation remediation: an unresolved selected
path collapsed to absence.

An explicit selection now authorizes the read outright and the probes
serve automatic discovery only. A selected client with an unreadable
config reports invalid with the read failure; one with no config
reports missing; automatic discovery still probes before inspecting.

* fix(uninstall): share shared-storage checks between ZCode and FreeBuff

clients() queued ~/.agents/mcp.json twice: once as zcode_fallback and once
as freebuff. ZCode has no discoveryPaths, so its strict read still blocked
uninstall on malformed shared text, despite FreeBuff's new retain-and-continue
behavior. For a valid owned entry, ZCode removed it first, so FreeBuff reported
skipped rather than removed.

Make the shared file's checks and removal one shared decision:
- Add zcodeDiscoveryPaths to ZCode so it has its own applicability evidence.
- Gate zcode_fallback push on applicable, not just zcodeFallbackPath presence.
- Report shared storage ownership as one decision for both clients:
  FreeBuff and ZCode now use clientOwnershipEvidencePaths together, so a
  recognizable REA-owned row proves ownership once for the shared storage, and
  both clients report the same result consistently.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* fix(uninstall): merge duplicated host and prove shared ownership from owned rows

Uninstall.ts declared systemUninstallHost twice, preventing module load,
with the exported copy returning only clients and the second copy missing
clientWriteBlocker. Merge into one exported host carrying both blockers.

hasOwnershipEvidence used access() existence, so an unrelated malformed
~/.agents/mcp.json established ownership and blocked every removal.
Ownership now requires a readable, recognizable REA-owned row via the
injected filesystem, so unrelated shared data stays retained.

Also cover ZCode discoveryPaths in its path test.

* fix(uninstall): keep denied product-local configurations fail-closed

Unproven product applicability marked every configuration path of that client unverified, so a denied ZCode profile turned an unreadable product-local config into a retained item: uninstall continued and could report complete with REA still registered. The retain-and-continue exception now applies only to storage REA does not own, classified once by clientSharedRegistrationPaths (shared configuration plus another product's same-scope fallback).

Covers the Greptile P1 on Uninstall.ts. Validation: the new test fails on the pre-fix Uninstall and passes after it; freebuff/zcode/updateMaintenance/bom/dsh suites green; clientLifecycle, clientRegistrationStatus and claudeDesktop keep the same 8 host failures as the pre-merge baseline (symlink EPERM, stale-vs-aligned on Windows).

* fix(update): retain FreeBuff when ZCode reads the shared fallback

Maintenance deduplicated clients on the path each inspection read, so ZCode's fallback view of ~/.agents/mcp.json marked that file "covered" and dropped FreeBuff from the scope. ZCode setup writes ~/.zcode/cli/config.json and deliberately leaves the fallback untouched (docs/client-configuration.md), so the emitted command refreshed only ZCode while the shared row both products load stayed pinned to the old package version. Each setup action rewrites only its own configuration path and no other action rewrites the shared row, so every selected client keeps its own maintenance action; the read-path covered/deduped filter is removed.

Covers the Codex P2 on UpdateMaintenance.ts:104. Validation: the new regression fails on e2fdec384 with {clients:["zcode"]} and passes with {clients:["freebuff","zcode"]}; updateMaintenance 31/31, setupClientConfigCleanupOwnership, cliUpdateAlias, updateOutput, cliStartupImports green; tsc --noEmit, oxlint (0 errors) and oxfmt --check clean; clientRegistrationStatus keeps the same 4 symlink/stale-vs-aligned failures this Windows host has on base e2fdec384 (verified by stashing the change).

🤖 Generated with Codebuff
Co-Authored-By: Codebuff <noreply@codebuff.com>

* fix(uninstall): preserve completed reads as shared ownership evidence

hasOwnershipEvidence caught every read failure and kept scanning, so a handle-close failure after a successful read — a RegularFileCleanupFailure whose completed outcome still contains the exact shared-file text — was discarded as "no proof". FreeBuff's applicability-unverified storage therefore never got its ownership fact, and once the retained handle blocked later reads, readClientConfiguration downgraded them to retained: inspection passed, removals soft-failed, and runUninstall(true) could purge REA data while the active shared registration remained. The catch now parses the completed outcome for the ownership text while missing or unreadable storage and malformed data keep their proves-nothing semantics, so ownership holds and every later read failure stays blocking.

Covers the Codex P2 on Uninstall.ts:252. Validation: the new regression fails on 4dbfdf1a9 (freebuff reports no blocking failure while the poisoned-scope error lands on claude_code) and passes after; setupClientConfigCleanupOwnership 25/25; the other 21 Uninstall-consumer suites are byte-identical to base 4dbfdf1a9 (61 pre-existing Windows-host failures: symlink EPERM, stale-vs-aligned); tsc --noEmit, oxlint (0 errors, same 6 warnings) and oxfmt --check clean.

🤖 Generated with Codebuff
Co-Authored-By: Codebuff <noreply@codebuff.com>

* fix(uninstall): keep owned-row proof through removal refusals

hasOwnershipEvidence treated any clientRegistrationRemoval refusal as no ownership: an effective REA-owned rea member shadowed by an earlier foreign duplicate (shadowed_unowned_member), or an owned native row beside a foreign V1 fallback (foreign_legacy_fallback), discarded the already-parsed positive row fact. With FreeBuff unverified and close failures recurring on the preflight/removal rereads, those failures were then downgraded to retained, so runUninstall(true) removed the skill and purged REA data while the active owned row remained. The refusal now carries the owned rows that motivated it — the refusal only refuses the edit — and hasOwnershipEvidence evaluates that fact on both paths; preflight and removal keep refusing the unsafe edit exactly as before.

Covers the Codex P2 on Uninstall.ts:269. Validation: the new regression fails on 225cb214a (freebuff reports no blocking failure while the poisoned-scope error lands on claude_code) and passes after; setupClientConfigCleanupOwnership 26/26; the 21 Uninstall-consumer suites are byte-identical to the recorded 225cb214a baseline (61 pre-existing Windows-host failures: symlink EPERM, stale-vs-aligned); tsc --noEmit, oxlint (0 errors, same 6 warnings) and oxfmt --check clean.

🤖 Generated with Codebuff
Co-Authored-By: Codebuff <noreply@codebuff.com>

* fix(uninstall): keep unresolved discovery probes from softening shared failures

The discovery probe swallowed every stat failure, so a FreeBuff profile denied with EACCES/EIO was indistinguishable from an absent profile: shared storage was marked applicability-unverified and, when ~/.agents/mcp.json also remained unreadable, the ownership and removal reads softened to retained. runUninstall(true) then removed the skill and purged REA data while an installed FreeBuff could still hold an active registration — the regression even reports complete. Absence (ENOENT) is now the only state that leaves shared paths unverified; any other probe failure leaves applicability unresolved, and shared-config failures stay blocking.

Covers the Codex P2 on Uninstall.ts:318. Validation: the new regression fails on 7572a7082 with status complete and purged data and passes after; freebuffClientConfiguration 13/13; the Uninstall-consumer batches are byte-identical to the recorded baselines (61 pre-existing Windows-host failures: symlink EPERM, stale-vs-aligned); tsc --noEmit, oxlint (0 errors, same warning rules) and oxfmt --check clean.

🤖 Generated with Codebuff
Co-Authored-By: Codebuff <noreply@codebuff.com>

* fix(uninstall): retain completed configuration reads as removal evidence

A close failure after a completed read discarded the text that read
produced, so an owned registration row the text proves softened to
retained. The completed text now drives removal, keeping shared-config
failures blocking when ownership evidence exists.

Co-Authored-By: Anthropic <noreply@anthropic.com>

* fix(uninstall): stop removal when a cleanup retry leaves a handle unreleased

A completed reread whose handle the cleanup retry cannot release now fails
blockingly instead of serving the text: with no owned row, the soft path
let removeAll purge managed data before close() reported the incomplete
cleanup. The completed text is served only after the retry releases the
handle; an unreleased handle is REA's own failure, never applicability
uncertainty, so it bypasses the retained softening.

Co-Authored-By: Anthropic <noreply@anthropic.com>

* fix(uninstall): keep the ZCode fallback when its profile probe is unresolved

A denied or failed profile probe leaves ZCode's applicability unresolved,
never absent, but the fallback branch dropped the shared row on
applicability alone: with the native config and FreeBuff's profile both
absent, an installed ZCode kept its uninspected registration while
uninstall purged skill and data. Unresolved probes now keep the fallback
in scope with the same fail-closed treatment as other unresolved shared
paths; definitive absence still keeps ZCode out of another product's
primary storage.

Co-Authored-By: Anthropic <noreply@anthropic.com>

* fix(setup): preserve a shared row's enable:false during FreeBuff repair

The shared agents file doubles as ZCode's fallback, so its `enable: false`
binds every reader: doctor now reports the disabled row as stale for
FreeBuff, but following that remediation rebuilt the generic JSON entry
without the flag and silently re-enabled a registration ZCode disabled.
Repairs of shared storage now carry the activation fact forward, while a
client's own native storage keeps its established single-reader repair
contract; the denied-profile uninstall regression also pins the
fallback's new fail-closed inspection beside the denied read.

Co-Authored-By: Anthropic <noreply@anthropic.com>

* test(uninstall): retarget the completed-reread regression to a released retry

The concurrent-writer regression held the reread handle open forever,
which the fail-closed path now serves: it duplicated the unreleased-handle
regression while documenting the opposite contract. The fixture's close
spy gains a failure limit so the cleanup retry releases the handle, and
the test again proves the completed text drives removal of the
concurrently added owned row, with purge verified against the cache
layout purge actually removes.

Co-Authored-By: Anthropic <noreply@anthropic.com>

* fix(doctor): report a preserved shared disable as a manual conflict

Preserving a shared row's enable:false left doctor recommending a setup
run that registrationCurrent correctly treats as already current, so the
scoped doctor returned needs_human forever. The shared-enable
interpretation now has one owner, sharedEnableFlagBinds, used by both
the activation rule and the remediation: a row disabled through the
shared flag reports the manual conflict and states that rea setup will
not change it, instead of an endlessly ineffective repair.

Co-Authored-By: Anthropic <noreply@anthropic.com>

* fix(doctor): keep a native ZCode disable on the setup repair path

The manual-conflict remediation matched a native zcode row through
sharedEnableFlagBinds, but setup drops enable:false on single-reader
storage, so a native disabled registration was told setup would not
change it. The remediation now reads setup's own writer rule,
exported as setupPreservesDisabledActivation: shared storage and the
zcode fallback view keep the manual-conflict message, while a native
row keeps the working rea setup instruction. Regressions pin both
remediations.

🤖 Generated with Codebuff
Co-Authored-By: Codebuff <noreply@codebuff.com>

* revert: drop the unrelated managed-CIL describe split

The split does not belong to FreeBuff client support and only widens this
PR's diff.

🤖 Generated with Codebuff
Co-Authored-By: Codebuff <noreply@codebuff.com>

* fix(uninstall): remove the shared agent registration once for both clients

ZCode's ~/.agents/mcp.json fallback and FreeBuff's own configuration queued the
same physical file twice, so ZCode removed the row and FreeBuff then reported
it absent, losing the outcome for the client that owns the file.

Resolve every configuration path to one owner -- the client whose
configuration it is -- and project that single inspection and removal to each
client that loads it. A fallback reader still contributes its discovery probe,
so an installed or unresolved reader keeps the shared file fail-closed.

Discovery also accepted a dangling ~/.config/freebuff-desktop link, which setup
and doctor reject because they follow the target, so an unrelated malformed
shared file blocked every other removal. Resolve the link before treating the
profile as installation evidence, keeping lstat for removal safety.

Also date the FreeBuff release wording against the published 6.7.0 package.

* fix(uninstall): keep a row per client when two clients own one file

OPENCODE_CONFIG can point OpenCode at FreeBuff's configuration file, where
OpenCode writes `mcp.rea` and FreeBuff writes `mcpServers.rea`. Grouping by
filename gave that path a single owner, so uninstall removed only OpenCode's
row, reported that removal for FreeBuff, and could purge managed data with
FreeBuff's registration still active.

Share the decision only through a fallback view of another client's row: every
client that declares the path as its own configuration keeps its own
inspection and removal, and the fallback reader reports each of them.

* fix(clients): preserve discovery and fallback registration identity

Follow product discovery link targets without losing configuration entry
presence or explicitly selected inspections. Associate fallback readers with
the format owner's registration table and project outcomes by owner and path,
so OpenCode removal cannot be reported as a ZCode fallback removal.

All three new boundary regressions fail against the previous source and pass
with the fixes. Validation: check:fast; 217 focused tests passed; the two
changed test files were rerun with 50 passing tests. No installed FreeBuff
client was launched.

---------

Co-authored-by: morluto <76467478+morluto@users.noreply.github.com>
Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com>
Co-authored-by: Kaoru0822 <208281322+kaoru0822-kitauji@users.noreply.github.com>
Co-authored-by: Codebuff <noreply@codebuff.com>
2026-10-25 11:29:17 +08:00
Vinícius Andrade 4ed33efb0c fix(cli): format arrays of empty objects without keys as JSON (#7058)
When formatting arrays of objects that have no own enumerable keys as
Markdown, formatObjectTable derives empty headers and outputs a malformed
table with an invalid delimiter row. Require at least one item with keys in
isObjectArray and fall back to JSON serialization when headers are empty.

Fixes #7057
2026-10-25 10:46:15 +08:00
morluto cb26e8ca63 fix(contracts): share ADB limits and preserve Rosetta register facts
Use the domain-owned activity extra count in CLI parsing and advertisement. Preserve nested Rosetta registers at the selecting parser and qualified register projection, sharing the existing aggregate budget.

Port the Rosetta work from Adolanium commits 1889ac153 and c9e93bd88 in #6976, including morluto follow-up 07fa932ee. Add malformed-container and mixed-thread budget controls. CLI/MCP coverage uses a recorded ReportCrash excerpt in an authored report, without generating a native crash or contacting an Android device.

Refs: #6291, #6976, #6977

Co-authored-by: Adolanium <94890352+Adolanium@users.noreply.github.com>
2026-10-25 09:49:26 +08:00
morluto f3ed1657f8 feat(mcp): support runtime analysis limit recovery (#7049)
* feat(mcp): support runtime analysis limit recovery

* refactor(config): remove unused limit re-exports

* fix(android): keep fixture release metadata dependency-free

* fix(settings): preserve provider budgets and recovery facts

* fix(tests): resolve lint plugins from their repository owner

* refactor(mcp): verify guidance delivery without frozen wording

* fix(android): align availability with runtime timeout

* test(recovery): assert limit facts instead of frozen wording

* fix(mcp): share runtime settings with the default JADX provider

* test(mcp): bound acknowledgements and release held work on failure

* fix(catalog): declare runtime settings tools as MCP-only
2026-10-25 09:45:26 +08:00
morluto 5938581b37 fix(async): own completion across test and provider boundaries 2026-10-25 08:29:20 +08:00
morluto fdf5a33fe2 refactor(tests): keep fixture adapters outside runtime 2026-10-25 08:29:20 +08:00
morluto 475f09d5ca chore(lint): enforce buffer and cancellation regression guards 2026-10-25 07:31:42 +08:00