d_a_e_fz work, doxygen revamp (#2127)

* initial freezard actor struct + setActionMode OK

* daE_FZ_Draw

* setReflectAngle

* mBoundSoundset

* daE_FZ_Execute & execute

* demoDelete

* daE_FZ_Delete & _delete

* CreateHeap

* useHeapInit

* cc_set

* mtx_set

* action WIP

* way_gake_check

* executeRollMove

* executeMove

* draw WIP

* executeDamage

* checkpoint

* create

* checkpoint

* daE_FZ_c::executeWait

* checkpoint

* daE_FZ_c::damage_check almost done

* rm asm

* rm headers

* setup_profile WIP + doxygen update

* fix merge issues

* docs fix?

* fix2

* doxygen updates

* setup g_profile_E_FZ, profile setup script WIP

* update github actions

* update progress.md

include/JSystem/JKernel/JKRAram.h

@@ -8,6 +8,11 @@
 class JKRHeap;
 class JKRAMCommand;
 class JKRAramBlock;
+
+/**
+ * @ingroup jsystem-jkernel
+ * 
+ */
 class JKRAram : public JKRThread {
 private:
     JKRAram(u32, u32, s32);

include/JSystem/JKernel/JKRAramArchive.h

@@ -2,11 +2,14 @@
 #define JKRARAMARCHIVE_H
 
 #include "JSystem/JKernel/JKRArchive.h"
-#include "dolphin/types.h"
 
 class JKRAramBlock;
 class JKRDvdFile;
 
+/**
+ * @ingroup jsystem-jkernel
+ * 
+ */
 class JKRAramArchive : public JKRArchive {
 public:
     JKRAramArchive(s32, JKRArchive::EMountDirection);

include/JSystem/JKernel/JKRAramBlock.h

@@ -4,6 +4,11 @@
 #include "JSystem/JSupport/JSUList.h"
 
 class JKRAramHeap;
+
+/**
+ * @ingroup jsystem-jkernel
+ * 
+ */
 class JKRAramBlock {
 public:
     JKRAramBlock(u32, u32, u32, u8, bool);

include/JSystem/JKernel/JKRAramHeap.h

@@ -5,6 +5,10 @@
 #include "JSystem/JKernel/JKRDisposer.h"
 #include "dolphin/os/OSMutex.h"
 
+/**
+ * @ingroup jsystem-jkernel
+ * 
+ */
 class JKRAramHeap : public JKRDisposer {
 public:
     enum EAllocMode {

include/JSystem/JKernel/JKRAramPiece.h

@@ -8,6 +8,11 @@
 
 class JKRAramBlock;
 class JKRDecompCommand;
+
+/**
+ * @ingroup jsystem-jkernel
+ * 
+ */
 class JKRAMCommand {
 public:
     typedef void (*AsyncCallback)(u32);
@@ -37,6 +42,10 @@ public:
     /* 0x94 */ void* field_0x94;
 };
 
+/**
+ * @ingroup jsystem-jkernel
+ * 
+ */
 class JKRAramPiece {
 public:
     static OSMutex mMutex;

include/JSystem/JKernel/JKRAramStream.h

@@ -5,6 +5,10 @@
 
 class JSUFileInputStream;
 
+/**
+ * @ingroup jsystem-jkernel
+ * 
+ */
 class JKRAramStreamCommand {
 public:
     enum Type {
@@ -35,6 +39,10 @@ public:
     /* 0x58 */ u32 field_0x58;
 };
 
+/**
+ * @ingroup jsystem-jkernel
+ * 
+ */
 class JKRAramStream : public JKRThread {
 private:
     JKRAramStream(s32);

include/JSystem/JKernel/JKRArchive.h

@@ -7,6 +7,10 @@
 
 class JKRHeap;
 
+/**
+ * @ingroup jsystem-jkernel
+ * 
+ */
 struct SArcHeader {
     /* 0x00 */ u32 signature;
     /* 0x04 */ u32 file_length;
@@ -18,6 +22,10 @@ struct SArcHeader {
     /* 0x1C */ u32 field_0x1c;
 };
 
+/**
+ * @ingroup jsystem-jkernel
+ * 
+ */
 struct SArcDataInfo {
     /* 0x00 */ u32 num_nodes;
     /* 0x04 */ u32 node_offset;
@@ -42,6 +50,10 @@ inline u16 read_big_endian_u16(void* ptr) {
 
 extern u32 sCurrentDirID__10JKRArchive;  // JKRArchive::sCurrentDirID
 
+/**
+ * @ingroup jsystem-jkernel
+ * 
+ */
 class JKRArchive : public JKRFileLoader {
 public:
     struct SDirEntry {

include/JSystem/JKernel/JKRAssertHeap.h

@@ -3,6 +3,10 @@
 
 #include "JSystem/JKernel/JKRHeap.h"
 
+/**
+ * @ingroup jsystem-jkernel
+ * 
+ */
 class JKRAssertHeap : public JKRHeap {
 protected:
     JKRAssertHeap(void*, u32, JKRHeap*, bool);

include/JSystem/JKernel/JKRCompArchive.h

@@ -6,6 +6,10 @@
 class JKRAramBlock;
 class JKRDvdFile;
 
+/**
+ * @ingroup jsystem-jkernel
+ * 
+ */
 class JKRCompArchive : public JKRArchive {
 public:
     JKRCompArchive(s32, JKRArchive::EMountDirection);

include/JSystem/JKernel/JKRDecomp.h

@@ -5,6 +5,11 @@
 #include "JSystem/JKernel/JKRThread.h"
 
 class JKRAMCommand;
+
+/**
+ * @ingroup jsystem-jkernel
+ * 
+ */
 class JKRDecompCommand {
 public:
     typedef void (*AsyncCallback)(u32);
@@ -30,6 +35,10 @@ public:
 #define JKRDECOMP_SYNC_BLOCKING 0
 #define JKRDECOMP_SYNC_NON_BLOCKING 1
 
+/**
+ * @ingroup jsystem-jkernel
+ * 
+ */
 class JKRDecomp : public JKRThread {
 private:
     JKRDecomp(s32);

include/JSystem/JKernel/JKRDisposer.h

@@ -4,6 +4,11 @@
 #include "JSystem/JSupport/JSUList.h"
 
 class JKRHeap;
+
+/**
+ * @ingroup jsystem-jkernel
+ * 
+ */
 class JKRDisposer {
 public:
     JKRDisposer();

include/JSystem/JKernel/JKRDvdAramRipper.h

@@ -2,11 +2,14 @@
 #define JKRDVDARAMRIPPER_H
 
 #include "JSystem/JKernel/JKRDvdRipper.h"
-#include "dolphin/types.h"
 
 class JKRAramBlock;
 class JKRAramStreamCommand;
 
+/**
+ * @ingroup jsystem-jkernel
+ * 
+ */
 class JKRADCommand {
 public:
     JKRADCommand();
@@ -33,6 +36,11 @@ public:
 };
 
 class JKRDvdFile;
+
+/**
+ * @ingroup jsystem-jkernel
+ * 
+ */
 class JKRDvdAramRipper {
 public:
     static JKRAramBlock* loadToAram(s32, u32, JKRExpandSwitch, u32, u32, u32*);

include/JSystem/JKernel/JKRDvdArchive.h

@@ -4,6 +4,11 @@
 #include "JSystem/JKernel/JKRArchive.h"
 
 class JKRDvdFile;
+
+/**
+ * @ingroup jsystem-jkernel
+ * 
+ */
 class JKRDvdArchive : public JKRArchive {
 public:
     JKRDvdArchive(s32, JKRArchive::EMountDirection);

include/JSystem/JKernel/JKRDvdFile.h

@@ -11,6 +11,11 @@ struct OSThread;
 class JKRADCommand;
 class JKRAramBlock;
 class JSUFileInputStream;
+
+/**
+ * @ingroup jsystem-jkernel
+ * 
+ */
 class JKRDvdFile : public JKRFile {
 public:
     JKRDvdFile();

include/JSystem/JKernel/JKRDvdRipper.h

@@ -15,6 +15,10 @@ struct SYaz0Header {
     u32 length;
 };
 
+/**
+ * @ingroup jsystem-jkernel
+ * 
+ */
 class JKRDMCommand {
     JKRDMCommand();
     ~JKRDMCommand();
@@ -22,6 +26,11 @@ class JKRDMCommand {
 
 class JKRHeap;
 class JKRDvdFile;
+
+/**
+ * @ingroup jsystem-jkernel
+ * 
+ */
 class JKRDvdRipper {
 public:
     static JSUList<JKRDMCommand> sDvdAsyncList;

include/JSystem/JKernel/JKRExpHeap.h

@@ -3,6 +3,10 @@
 
 #include "JSystem/JKernel/JKRHeap.h"
 
+/**
+ * @ingroup jsystem-jkernel
+ * 
+ */
 class JKRExpHeap : public JKRHeap {
 public:
     enum EAllocMode {

include/JSystem/JKernel/JKRFile.h

@@ -3,6 +3,10 @@
 
 #include "JSystem/JKernel/JKRDisposer.h"
 
+/**
+ * @ingroup jsystem-jkernel
+ * 
+ */
 class JKRFile : public JKRDisposer {
 public:
     JKRFile() : mIsAvailable(false) {}

include/JSystem/JKernel/JKRFileCache.h

@@ -4,6 +4,11 @@
 #include "JSystem/JKernel/JKRFileLoader.h"
 
 class JKRHeap;
+
+/**
+ * @ingroup jsystem-jkernel
+ * 
+ */
 class JKRFileCache : public JKRFileLoader {
 public:
     class CCacheBlock {

include/JSystem/JKernel/JKRFileFinder.h

@@ -3,6 +3,10 @@
 
 #include "dolphin/dvd.h"
 
+/**
+ * @ingroup jsystem-jkernel
+ * 
+ */
 class JKRFileFinder {
 public:
     JKRFileFinder() {
@@ -30,6 +34,11 @@ protected:
 };
 
 class JKRArchive;
+
+/**
+ * @ingroup jsystem-jkernel
+ * 
+ */
 class JKRArcFinder : public JKRFileFinder {
 public:
     JKRArcFinder(JKRArchive*, s32, s32);

include/JSystem/JKernel/JKRFileLoader.h

@@ -2,9 +2,13 @@
 #define JKRFILELOADER_H
 
 #include "JSystem/JKernel/JKRDisposer.h"
-#include "dolphin/types.h"
 
 class JKRFileFinder;
+
+/**
+ * @ingroup jsystem-jkernel
+ * 
+ */
 class JKRFileLoader : public JKRDisposer {
 public:
     JKRFileLoader(void);

include/JSystem/JKernel/JKRHeap.h

@@ -9,6 +9,10 @@ typedef void (*JKRErrorHandler)(void*, u32, int);
 
 extern bool data_804508B0;
 
+/**
+ * @ingroup jsystem-jkernel
+ * 
+ */
 class JKRHeap : public JKRDisposer {
 public:
     class TState {

include/JSystem/JKernel/JKRMemArchive.h

@@ -8,6 +8,10 @@ enum JKRMemBreakFlag {
     JKRMEMBREAK_FLAG_UNKNOWN1 = 1,
 };
 
+/**
+ * @ingroup jsystem-jkernel
+ * 
+ */
 class JKRMemArchive : public JKRArchive {
 public:
     JKRMemArchive(s32, JKRArchive::EMountDirection);

include/JSystem/JKernel/JKRSolidHeap.h

@@ -3,6 +3,10 @@
 
 #include "JSystem/JKernel/JKRHeap.h"
 
+/**
+ * @ingroup jsystem-jkernel
+ * 
+ */
 class JKRSolidHeap : public JKRHeap {
 public:
     struct Unknown {

include/JSystem/JKernel/JKRThread.h

@@ -4,14 +4,22 @@
 #include "JSystem/JKernel/JKRHeap.h"
 #include "dolphin/os/OSMessage.h"
 #include "dolphin/os/OSTime.h"
-#include "dolphin/types.h"
 
+/**
+ * @ingroup jsystem-jkernel
+ * 
+ */
 struct JKRThreadName_ {
     s32 id;
     char* name;
 };
 
 class JUTConsole;
+
+/**
+ * @ingroup jsystem-jkernel
+ * 
+ */
 class JKRThread : JKRDisposer {
 public:
     class TLoad {
@@ -130,6 +138,10 @@ public:
 typedef void (*JKRThreadSwitch_PreCallback)(OSThread* current, OSThread* next);
 typedef void (*JKRThreadSwitch_PostCallback)(OSThread* current, OSThread* next);
 
+/**
+ * @ingroup jsystem-jkernel
+ * 
+ */
 class JKRThreadSwitch {
 public:
     JKRThreadSwitch(JKRHeap*);