Commit Graph

450 Commits

Author SHA1 Message Date
konsti
f4f67ebde0 Rebase: Uninstall existing non-editable versions when installing editable requirements bug (#682)
Separate branch for rebasing #677 onto main because i don't trust the
rebase enough to force push.

Closes #677.

---

If you install `black` from PyPI, then `-e ../black`, we need to
uninstall the existing `black`. This sounds simple, but that in turn
requires that we _know_ `-e ../black` maps to the package `black`, so
that we can mark it for uninstallation in the install plan. This, in
turn, means that we need to build editable dependencies prior to the
install plan.

This is just a bunch of reorganization to fix that specific bug
(installing multiple versions of `black` if you run through the above
workflow): we now run through the list of editables upfront, mark those
that are already installed, build those that aren't, and then ensure
that `InstallPlan` correctly removes those that need to be removed, etc.

Closes #676.

Co-authored-by: Charlie Marsh <charlie.r.marsh@gmail.com>
2023-12-18 09:28:14 +00:00
Charlie Marsh
0bb2c92246 Add editable install support to pip-install (#675)
Per the title: adds support for `-e` installs to `puffin pip-install`.
There were some challenges here around threading the editable installs
to the right places. Namely, we want to build _once_, then reuse the
editable installs from the resolution. At present, we were losing the
`editable: true` flag on the `Dist` that came back through the
resolution, so it required some changes to the resolver.

Closes https://github.com/astral-sh/puffin/issues/672.
2023-12-18 09:52:32 +01:00
konsti
8c6463d220 Allow identical VIRTUAL_ENV and CONDA_PREFIX env vars (#681)
Port of https://github.com/PyO3/maturin/pull/1879 for
https://github.com/PyO3/maturin/issues/1878
2023-12-18 08:42:31 +00:00
Charlie Marsh
77c6e6fa6c Add support for reinstall to editable packages (#674)
Closes https://github.com/astral-sh/puffin/issues/673.
2023-12-17 15:41:57 +00:00
Charlie Marsh
00e1c33af4 Add an editable index to the site-packages registry (#671)
This PR modifies `SitePackages` to store all distributions in a flat
vector, and maintain two indexes (hash maps) from "per-element data for
an element in the vector" to "index of that element". This enables us to
maintain a map on both package name and editable URL.
2023-12-17 03:44:36 +00:00
Charlie Marsh
08edd173db Add support for editable packages in pip-uninstall (#670) 2023-12-17 02:56:37 +00:00
konsti
f059c6e6a6 Support editable in pip-sync and pip-compile (#587)
Support `-e path/do/dir` in pip-sync and and pip-compile.
2023-12-16 22:37:34 +00:00
Charlie Marsh
f62458f600 Add explicit error message for URLs without package names (#669)
`pip` supports installing packages without names (e.g.,
`git+https://github.com/pallets/flask.git`), but it doesn't adhere to
the PEP grammar, and we don't yet support it (and may never) (#313).

This PR adds a dedicated error path for such cases, to ensure that we
can give meaningful feedback to the user:

```
error: Couldn't parse requirement in requirements.in position 0 to 18
  Caused by: URL requirement is missing a package name; expected: `package_name @ https://google.com`
https://google.com
^^^^^^^^^^^^^^^^^^
```

Closes https://github.com/astral-sh/puffin/issues/650.
2023-12-16 21:14:34 +00:00
konsti
71964ec7a8 Switch to msgpack in the cached client (#662)
This gives a 1.23 speedup on transformers-extras. We could change to
msgpack for the entire cache if we want. I only tried this format and
postcard so far, where postcard was much slower (like 1.6s).

I don't actually want to merge it like this, i wanted to figure out the
ballpark of improvement for switching away from json.

```
hyperfine --warmup 3 --runs 10 "target/profiling/puffin pip-compile --cache-dir cache-msgpack scripts/requirements/transformers-extras.in" "target/profiling/branch pip-compile scripts/requirements/transformers-extras.in"
Benchmark 1: target/profiling/puffin pip-compile --cache-dir cache-msgpack scripts/requirements/transformers-extras.in
  Time (mean ± σ):     179.1 ms ±   4.8 ms    [User: 157.5 ms, System: 48.1 ms]
  Range (min … max):   174.9 ms … 188.1 ms    10 runs

Benchmark 2: target/profiling/branch pip-compile scripts/requirements/transformers-extras.in
  Time (mean ± σ):     221.1 ms ±   6.7 ms    [User: 208.1 ms, System: 46.5 ms]
  Range (min … max):   213.5 ms … 235.5 ms    10 runs

Summary
  target/profiling/puffin pip-compile --cache-dir cache-msgpack scripts/requirements/transformers-extras.in ran
    1.23 ± 0.05 times faster than target/profiling/branch pip-compile scripts/requirements/transformers-extras.in
```

Disadvantage: We can't manually look into the cache anymore to debug
things

- [ ] Check more formats, i currently only tested json, msgpack and
postcard, there should be other formats, too
- [x] Switch over `CachedByTimestamp` serialization (for the interpreter
caching)
- [x] Switch over error handling and make sure puffin is still resilient
to cache failure
2023-12-16 21:01:35 +00:00
Charlie Marsh
e4673a0c52 Modify PEP 508 cursor to use byte offsets (#668)
This enables us to remove a number of allocations (in particular,
`peek_while` and `take_while` no longer allocate). It also makes it
trivial to move the cursor to a new location, since you can just slice
and call `.chars()`. At present, moving to a new location would require
converting the iterator to a string, then back to a character iterator.
2023-12-15 22:05:28 +00:00
Charlie Marsh
875c9a635e Rename CharIter to Cursor (#667)
This better aligns with the analogous struct that we have in Ruff.
2023-12-15 21:57:59 +00:00
konsti
620f73b38b Speed up version parsing for a 1.27±0.03 speedup in transformers-extras with conservative changes (#660)
Two low-hanging fruits as optimizations for version parsing: A fast path
for release only versions and removing the regex from version specifiers
(still calling into version's parsing regex if required). This enables
optimizing the serde format since we now see the serde part instead of
only PEP 440 parsing. I intentionally didn't rewrite the full PEP 440 at
this step.

```console
$ hyperfine --warmup 5 --runs 50 "target/profiling/puffin pip-compile scripts/requirements/transformers-extras.in" "target/profiling/main pip-compile scripts/requirements/transformers-extras.in"
  Benchmark 1: target/profiling/puffin pip-compile scripts/requirements/transformers-extras.in
    Time (mean ± σ):     217.1 ms ±   3.2 ms    [User: 194.0 ms, System: 55.1 ms]
    Range (min … max):   211.0 ms … 228.1 ms    50 runs

  Benchmark 2: target/profiling/main pip-compile scripts/requirements/transformers-extras.in
    Time (mean ± σ):     276.7 ms ±   5.7 ms    [User: 252.4 ms, System: 54.6 ms]
    Range (min … max):   268.9 ms … 303.5 ms    50 runs

  Summary
    target/profiling/puffin pip-compile scripts/requirements/transformers-extras.in ran
      1.27 ± 0.03 times faster than target/profiling/main pip-compile scripts/requirements/transformers-extras.in
```

---------

Co-authored-by: Andrew Gallant <andrew@astral.sh>
2023-12-15 14:03:35 -05:00
Charlie Marsh
305b9b080a Show resolution error once on pip-install failure (#665)
Closes https://github.com/astral-sh/puffin/issues/664.
2023-12-15 18:43:23 +00:00
Charlie Marsh
47290f784e Add fixup for invalid double quotes (#663)
Closes https://github.com/astral-sh/puffin/issues/658.
2023-12-15 18:11:22 +00:00
Charlie Marsh
9470c20e7a Avoid double resolution during source builds (#656)
## Summary

This PR ensures that we re-use the resolution to install the build
dependencies when building a source distribution. Currently, we only
pass along the list of requirements, and then use the `Finder` to map
each requirement to a distribution. But we already determine the correct
distribution when resolving!

Closes https://github.com/astral-sh/puffin/issues/655.
2023-12-15 17:27:16 +00:00
Charlie Marsh
1129661a22 Ignore missing manifest entries in the built wheel cache (#654)
## Summary

This is more of a hypothetical problem, but the cache manifest could in
theory get out-of-sync with the contents on disk. This PR modifies the
`BuiltWheelMetadata` lookup to warn (but not fail) if the manifest
includes a wheel that no longer exists on disk. You can mimic this by
removing a wheel from the `built-wheels-v0` cache without modifying the
manifest correspondingly.
2023-12-15 17:24:09 +00:00
Charlie Marsh
84093773ef Store source distribution sources in the cache (#653)
## Summary

This PR modifies `source_dist.rs` to store source distributions (from
remote URLs) in the cache. The cache structure for registries now looks
like:

<img width="1053" alt="Screen Shot 2023-12-14 at 10 43 43 PM"
src="https://github.com/astral-sh/puffin/assets/1309177/3c2dbf6b-5926-41f2-b69b-74031741aba8">

(I will update the docs prior to merging, if approved.)

The benefit here is that we can reuse the source distribution (avoid
download + unzipping it) if we need to build multiple wheels. In the
future, it will be even more relevant, since we'll need to reuse the
source distribution to support
https://github.com/astral-sh/puffin/issues/599.

I also included some misc. refactors to DRY up repeated operations and
add some more abstraction to `source_dist.rs`.
2023-12-15 17:19:33 +00:00
Charlie Marsh
a361ccfbb3 Remove additional metadata call in source_dist.rs (#652) 2023-12-14 19:45:31 +00:00
Charlie Marsh
22c7057b35 Expand environment variables in URLs (#640)
## Summary

This PR enables users to express relative dependencies via environment
variables. Like pip, PDM, Hatch, Rye, and others, we now allow users to
express dependencies like:

```text
flask @ file://${PROJECT_ROOT}/flask-3.0.0-py3-none-any.whl
```

In the compiled requirements file, we'll also preserve the unexpanded
environment variable.

Closes https://github.com/astral-sh/puffin/issues/592.
2023-12-14 15:09:12 +00:00
Charlie Marsh
ed8dfbfcf7 Preserve verbatim URLs (#639)
## Summary

This PR adds a `VerbatimUrl` struct to preserve verbatim URLs throughout
the resolution and installation pipeline. In short, alongside the parsed
`Url`, we also keep the URL as written by the user. This enables us to
display the URL exactly as written by the user, rather than the
serialized path that we use internally.

This will be especially useful once we start expanding environment
variables since, at that point, we'll be able to write the version of
the URL that includes the _unexpected_ environment variable to the
output file.
2023-12-14 15:03:39 +00:00
Charlie Marsh
eef9612719 Allow reporters to take dyn Metadata (#645) 2023-12-14 12:36:28 +01:00
Charlie Marsh
1a62ca0c62 Move source dist extraction into extract crate (#649) 2023-12-14 05:56:49 +00:00
Charlie Marsh
402b728bf7 Use fs_err with AutoStream (#648) 2023-12-14 04:56:55 +00:00
Charlie Marsh
db7e2dedbb Move archive extraction into its own crate (#647)
We have some shared utilities beyond `puffin-build` and
`puffin-distribution`, and further, I want to be able to access the
sdist archive extraction logic from `puffin-distribution`. This is
really generic, so moving into its own crate.
2023-12-14 04:49:09 +00:00
Charlie Marsh
388641643d Remove SourceDistDownload struct (#646)
This is created in one place, then immediately destructed into fields.
2023-12-14 02:34:50 +00:00
Charlie Marsh
e0127581b6 Use fs_err in more places (#644) 2023-12-14 01:11:45 +00:00
Charlie Marsh
4fd69c74b6 Use URL rather than String in direct URL types (#643) 2023-12-14 01:01:27 +00:00
Charlie Marsh
8071a23863 Add dedicated ID types to avoid opaque strings (#642)
This allows us to enforce type safety within the resolver. For example,
in the index, we can remove `String` as a key type and enforce that
callers _must_ present us with a `PackageId`. (This actually caught one
bug, where we were using the SHA rather than the package ID. That bug
shouldn't have had any effect given where it was, since those are 1:1,
but it's still problematic.)
2023-12-14 00:53:33 +00:00
Charlie Marsh
3549d9638e Inline all snapshot files (#641)
Right now, we're inconsistent between checking in and inlining these.
The outputs are small in Puffin, so let's just inline them in all cases.
2023-12-14 00:35:38 +00:00
Charlie Marsh
2da6563a64 Use Manifest::simple in tests (#638) 2023-12-13 17:41:29 +00:00
Charlie Marsh
eb1a630db2 Avoid hard-error for non-existent extras (#627)
## Summary

When resolving `transformers[tensorboard]`, the `[tensorboard]` extra
doesn't exist. Previously, we returned "unknown" dependencies for this
variant, which leads the resolution to try all versions, then fail. This
PR instead warns, but returns the base dependencies for the package,
which matches `pip`. (Poetry doesn't even warn, it just proceeds as
normal.)

Arguably, it would be better to return a custom incompatibility here and
then propagate... But this PR is better than the status quo, and I don't
know if we have support for that behavior yet...? (\cc @zanieb)

Closes #386.

Closes https://github.com/astral-sh/puffin/issues/423.
2023-12-13 17:36:27 +00:00
konsti
5c38825b93 Don't preserve tar mtime to work around tar-rs bug. (#634)
Don't preserve mtime to work around
https://github.com/alexcrichton/tar-rs/issues/349 to fix #579.
2023-12-13 15:11:02 +00:00
Charlie Marsh
69581c03c3 Enable package overrides in pip-compile (#631)
## Summary

This PR enables overrides to be passed to `pip-compile` and
`pip-install` via a new `--overrides` flag.

When overrides are provided, we effectively replace any requirements
that are overridden with the overridden versions. This is applied at all
depths of the tree.

The merge semantics are such that we replace _all_ requirements of a
package with _all_ requirements from the overrides files. So, for
example, if a package declares:

```
foo >= 1.0; python_version < '3.11'
foo < 1.0; python_version >= '3.11'
```

And the user provides an override like:
```
foo >= 2.0
```

Then _both_ of the `foo` requirements in the package will be replaced
with the override.

If instead, the user provided an override like:
```
foo >= 2.0; python_version < '3.11'
foo < 3.0; python_version >= '3.11'
```

Then we'd replace _both_ of the original `foo` requirements with both of
these overrides. (In technical terms, for each package in the
requirements file, we flat-map over its overrides.)

Closes https://github.com/astral-sh/puffin/issues/511.
2023-12-13 15:03:38 +00:00
konsti
e51b397779 Typo: editable -> editables (#637)
Split out to minimize the diff in #587
2023-12-13 13:24:28 +00:00
konsti
0b20f6a25a Proper unzip error type (#636)
Move the `Unzip` trait from anyhow to `ZipError|io::Error`.
2023-12-13 12:55:59 +00:00
konsti
0dde84dd27 Fix main (#635)
Seems to be a PR timing error
2023-12-13 13:55:06 +01:00
Charlie Marsh
ea920e22d1 Validate environment after pip-sync (#629)
Not 100% sure that we actually want to do this, it seems reasonable
though.

Closes https://github.com/astral-sh/puffin/issues/410.
2023-12-13 09:13:43 +01:00
Charlie Marsh
cbfd39093e Clean up some function signatures (#633) 2023-12-13 06:21:47 +00:00
Charlie Marsh
920e10fc8f Use FxHash consistently (#632) 2023-12-13 05:36:03 +00:00
Charlie Marsh
edd741bf13 Add a diagnostic to detect invalid Python versions (#630)
Related to: https://github.com/astral-sh/puffin/issues/410.
2023-12-13 03:45:02 +00:00
Charlie Marsh
a24eb57e93 Make warnings user-facing (#628)
## Summary

Now, `puffin_warnings::warn_once` and `puffin_warnings::warn` will go to
`stderr`, as long as the user isn't running under `--quiet`. Previously,
these went through `tracing`, and so were only visible when running
under `--verbose`.
2023-12-12 21:24:38 -05:00
Zanie Blue
490fb55ac5 Use available versions to simplify unsat error reports (#547)
Uses https://github.com/pubgrub-rs/pubgrub/pull/156 to consolidate
version ranges in error reports using the actual available versions for
each package.

Alternative to https://github.com/zanieb/pubgrub/pull/8 which implements
this behavior as a method in the `Reporter` — here it's implemented in
our custom report formatter (#521) instead which requires no upstream
changes.

Requires https://github.com/zanieb/pubgrub/pull/11 to only retrieve the
versions for packages that will be used in the report.

This is a work in progress. Some things to do:
- ~We may want to allow lazy retrieval of the version maps from the
formatter~
- [x] We should probably create a separate error type for no solution
instead of mixing them with other resolve errors
- ~We can probably do something smarter than creating vectors to hold
the versions~
- [x] This degrades error messages when a single version is not
available, we'll need to special case that
- [x] It seems safer to coerce the error type in `resolve` instead of
`solve` if feasible
2023-12-12 23:25:16 +00:00
Charlie Marsh
a8512d7d51 Remove one string clone (#626) 2023-12-12 20:56:15 +00:00
konsti
a24a681db9 Towards using prepare_metadata_for_build_wheel in the resolver (#616)
Make `prepare_metadata_for_build_wheel` accessible across the puffin
codebase by splitting the built call into a setup, a metadata and a
wheel call. This does not actually use the hook yet, but it's the
required refactoring for it.

Part of #599.
2023-12-12 20:45:37 +00:00
Charlie Marsh
85c37b2b9c Add extra to debug logging (#625) 2023-12-12 20:09:09 +00:00
Charlie Marsh
f459e1ee50 Use a non-async Mutex in OnceMap (#624)
I don't know why, but this seems to resolve
https://github.com/astral-sh/puffin/issues/619. The Tokio docs also say
that using Tokio's Mutex is _not_ recommended unless you need to hold
the Mutex across an `.await`, which we don't.

Since this is a non-deterministic failure, I just ran it a bunch of
times and ensured it didn't hang (whereas it did hang occasionally prior
to this PR).

Closes https://github.com/astral-sh/puffin/issues/619
2023-12-12 14:59:45 -05:00
Charlie Marsh
4fb2e0955e Add a fast-path to skip resolution when installation is complete (#613)
For a very large resolution (a few hundred packages), I see 13ms vs.
400ms for a no-op. It's worth optimizing this case, in my opinion.
2023-12-12 17:43:12 +00:00
Charlie Marsh
3aaab32a9d Omit extra in resolver progress (#623)
Closes #621.
2023-12-12 12:41:18 -05:00
Charlie Marsh
6c7f5cb846 Validate installed packages in virtual environment (#611)
## Summary

Now, after running `pip-install`, we validate that the set of installed
packages is consistent -- that is, that we don't have any packages that
are missing dependencies, or incompatible versions of installed
dependencies.
2023-12-12 17:33:38 +00:00
Charlie Marsh
c764155988 Avoid double-resolving during pip-install (#610)
## Summary

At present, when performing a `pip-install`, we first do a resolution,
then take the set of requirements and basically run them through our
`pip-sync`, which itself includes re-resolving the dependencies to get a
specific `Dist` for each package. (E.g., the set of requirements might
say `flask==3.0.0`, but the installer needs a specific _wheel_ or source
distribution to install.)

This PR removes this second resolution by exposing the set of pinned
packages from the resolution. The main challenge here is that we have an
optimization in the resolver such that we let the resolver read metadata
from an incompatible wheel as long as a source distribution exists for a
given package. This lets us avoid building source distributions in the
resolver under the assumption that we'll be able to install the package
later on, if needed. As such, the resolver now needs to track the
resolution and installation filenames separately.
2023-12-12 17:29:09 +00:00